Optimal HLA imputation of admixed population with dimension reduction
Venceslas Douillard, Nayane dos Santos Brito Silva, Sonia Bourguiba, Michel Satya Naslavsky, Marília O. Scliar, Yeda A. O. Duarte, Mayana Zatz, Maria Rita Passos‐Bueno, Sophie Limou, Pierre‐Antoine Gourraud, Elise Launay, Erick C. Castelli, Nicolas Vince
The paper evaluates HLA imputation accuracy in admixed populations using dimension reduction, finding that custom reference panels outperform standard ones for specific genetic models.
bioRxiv · Apr 12, 2023 · PreprintGenomics