Author

Xiaoqi Li

Brigham and Women's HospitalORCID 0000-0002-4125-5726Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Xiaoqi Li1 paper · University of North Carolina at Chapel Hill

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Organism:human· 1 Research Focus:polygenic risk· 1 Assay:scRNA-seq· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Can CheniD· 1 shared Clemens R. ScherzeriD· 1 shared Elena V. KharitonovaiD· 1 shared Haibo ZhouiD· 1 shared Huaxiu YaoiD· 1 shared Jia WeniD· 1 shared Laura M. RaffieldiD· 1 shared Laura Y. ZhouiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Can ChenORCID

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2 papers

Recent·Most cited

BioinformaticsHuman Genetics and Genomics AdvancesPeer-reviewedAug 8, 2025

Variational Autoencoder-based Model Improves Polygenic Prediction in Blood Cell Traits

Xiaoqi Li, Elena V. Kharitonova, Minxing Pang…·Quan Sun

This study introduces VAE-PRS, a deep learning model that improves polygenic prediction for blood cell traits by capturing interaction effects and outperforming traditional methods in 14 out of 16 traits.

2 citations

humanwhole-genome sequencing

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BioinformaticsBioinformaticsPeer-reviewedMay 17, 2021

powerEQTL: An R package and shiny application for sample size and power calculation of bulk tissue and single-cell eQTL analysis

Xianjun Dong, Xiaoqi Li, Tzuu-Wang Chang…·Weiliang Qiu

The paper introduces powerEQTL, an R package and web tool for calculating sample size and power for bulk and single-cell eQTL analysis.

30 citations

bulk RNA-seqscRNA-seq

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