Author

Alexandra A. Soukup

University of Wisconsin–MadisonORCID 0000-0002-4149-2393Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Colin N. DeweyiD· 1 shared Emery H. BresnickiD· 1 shared Peng LiuiD· 1 shared Sündüz KeleşiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

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4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Colin N. DeweyORCID

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1 paper

Recent·Most cited

BioinformaticsGenome ResearchPeer-reviewedNov 1, 2020

PRAM: a novel pooling approach for discovering intergenic transcripts from large-scale RNA sequencing experiments

Peng Liu, Alexandra A. Soukup, Emery H. Bresnick…·Sündüz Keleş

PRAM improves transcript discovery from RNA-seq data by combining datasets in a single step, outperforming two-step methods and identifying new transcripts in human and mouse data.

2 citations

humanmouse

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