Haonan Wu

The paper introduces resources for large-scale metagenome comparison in the SRA, revealing trends in microbial discovery and improving assembly quality.

This paper introduces a k-mer-based estimator for substitution rates between repetitive sequences, showing it remains accurate for repetitive genomic regions like centromeres.

This paper introduces three repeat-robust k-mer-based mutation rate estimators and evaluates them on highly repetitive alpha satellite sequences, finding that the strongest estimator outperforms existing methods.