Author

Janne Gesine Thöming

RigshospitaletORCID 0000-0002-4415-105XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:clustering· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Adam Z. RosenthaliD· 1 shared Christian L. MülleriD· 1 shared Johannes OstneriD· 1 shared Roberto Olayo-AlarcóniD· 1 shared Susanne HäußleriD· 1 shared Tim Kirk· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Adam Z. RosenthalORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintJun 22, 2024

BacSC: A general workflow for bacterial single-cell RNA sequencing data analysis

Johannes Ostner, Tim Kirk, Roberto Olayo-Alarcón…·Christian L. Müller

BacSC is a computational pipeline for bacterial single-cell RNA sequencing data that automates quality control, dimension reduction, and clustering, improving subpopulation detection across multiple bacterial species.

1 citation

bacteria (other)scRNA-seq

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