Author

Raghd Rostom

European Bioinformatics InstituteORCID 0000-0002-4453-3357Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:eQTL / molecular QTL mapping· 1 Research Focus:fine-mapping· 1

Frequent Co-Authors

Oliver StegleiD· 2 shared Sarah Amalia TeichmanniD· 2 shared Tzachi HagaiiD· 2 shared Benjamin D. SimonsiD· 1 shared Berthold GöttgensiD· 1 shared Céline Gomez· 1 shared Daniel J. GaffneyiD· 1 shared Daniel J. KunziD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersGenetics

Oliver StegleORCID

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2 papers

Recent·Most cited

GeneticsNature GeneticsPeer-reviewedJun 1, 2023

Mapping interindividual dynamics of innate immune response at single-cell resolution

Natsuhiko Kumasaka, Raghd Rostom, Ni Huang…·Sarah Amalia Teichmann

The paper develops GASPACHO to identify dynamic eQTLs in antiviral responses using single-cell RNA-seq, uncovering thousands of eQTLs and linking them to disease risk loci.

46 citationstop 2%

humanscRNA-seq

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GenomicsbioRxivPreprintNov 26, 2018

Cardelino: Integrating whole exomes and single-cell transcriptomes to reveal phenotypic impact of somatic variants

Davis James McCarthy, Raghd Rostom, Yuanhua Huang…·Sarah Amalia Teichmann

Cardelino integrates whole exomes and single-cell transcriptomes to identify clone-of-origin and reveal phenotypic impacts of somatic variants in human fibroblasts.

13 citations

humanwhole-exome sequencing

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