Nuclear instance segmentation and tracking for preimplantation mouse embryos
Hayden Nunley, Binglun Shao, Prateek Grover, Jaspreet Singh, Bradley W. Joyce, Rebecca Kim, Abraham Q. Kohrman, Aaron Watters, Zsombor Tamas Gal, Alison Kickuth, Madeleine Chalifoux, Stanislav Y. Shvartsman, Eszter Pósfai, Lisa Brown
The paper introduces a dataset and method for nuclear segmentation and tracking in mouse embryos, identifying Stardist-3D as the most accurate method for this task.
bioRxiv · Mar 14, 2023 · PreprintDevelopmental Biology