Author

Katie Barr

Norwich Research ParkORCID 0000-0002-4577-7097Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Bernardo ClavijoiD· 2 shared Gonzalo Garcia AccinelliiD· 2 shared Jonathan WrightiD· 2 shared Luis YanesiD· 2 shared Darren HeavensiD· 1 shared Federica Di PalmaiD· 1 shared

Activity by Year

2017-2017 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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2 shared papersBioinformatics

Bernardo ClavijoORCID

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2 papers

Recent·Most cited

Skip-mers: increasing entropy and sensitivity to detect conserved genic regions with simple cyclic q-grams

Bernardo Clavijo, Gonzalo Garcia Accinelli, Luis Yanes, Katie Barr, Jonathan Wright

This paper introduces skip-mers as an improved method for detecting conserved genic regions, showing increased entropy and sensitivity compared to traditional k-mers.

bioRxiv · Sep 19, 2017 · PreprintBioinformatics

W2RAP: a pipeline for high quality, robust assemblies of large complex genomes from short read data

Bernardo Clavijo, Gonzalo Garcia Accinelli, Jonathan Wright, Darren Heavens, Katie Barr, Luis Yanes, Federica Di Palma

The paper introduces a pipeline for generating high-quality genome assemblies from short read data, demonstrating its effectiveness on plant and human datasets.

bioRxiv · Feb 22, 2017 · PreprintBioinformatics