Author

Kim M. Murray

Institute for Systems BiologyORCID 0000-0002-4592-5459Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Assay:flow cytometry· 1

Frequent Co-Authors

Andrew WebsteriD· 2 shared James R. HeathiD· 2 shared Jason D. GoldmaniD· 2 shared Jingyi XieiD· 2 shared Jongchan ChoiiD· 2 shared Michaela McKasson· 2 shared Rick Edmark· 2 shared Rongyu ZhangiD· 2 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioengineering

Andrew WebsterORCID

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2 papers

Recent·Most cited

Whole-Proteome Screening and Multi-Modal Profiling of Antigen-Specific CD4+ T Cells at Single-Cell Resolution

Rongyu Zhang, Qi Jin, Michaela McKasson, Jongchan Choi, Vanessa Gutiérrez, Conor Brennan, Sunga Hong, William Chour, Rachel H. Ng, Jingyi Xie, Dan Yuan, Andrew Webster, Simranjeet K. Sidhu, Abby Anderson, Daniel Chen, , James R. Heath

The paper develops a high-throughput platform to profile antigen-specific CD4+ T cells at single-cell resolution, identifying immunogenic features and functional heterogeneity in viral and cancer contexts.

bioRxiv · Apr 21, 2025 · PreprintBioengineering

APMAT analysis reveals the association between CD8 T cell receptors, cognate antigen, and T cell phenotype and persistence

Jingyi Xie, Daniel G. Chen, William Chour, Rachel H. Ng, Rongyu Zhang, Dan Yuan, Jongchan Choi, Michaela McKasson, Pamela Troisch, Brett Smith, Lesley Jones, Andrew Webster, Yusuf Rasheed, Sarah Li, Rick Edmark, , James R. Heath

APMAT analysis links CD8 T cell receptors, cognate antigens, and T cell phenotype/persistence using integrated experimental-computational methods.

Nature Communications · Feb 6, 2025Peer-reviewedImmunology