Author

Takumi Murakami

National Institute of GeneticsORCID 0000-0002-4738-0464Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Plant Biology· 2

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Yusuke SaijoiD· 2 shared Asahi AdachiiD· 1 shared Daisuke Umeki· 1 shared Eriko TanakaiD· 1 shared John Jewish A. DomingueziD· 1 shared Kiwamu MinamisawaiD· 1 shared Masako Fuji· 1 shared Masayuki Fujiwara· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersPlant Biology

Yusuke SaijoORCID

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2 papers

Recent·Most cited

Soil nutrition-dependent dynamics of the root-associated microbiome in paddy rice

Asahi Adachi, John Jewish A. Dominguez, Yuniar Devi Utami, Masako Fuji, Sumire Kirita, Shunsuke Imai, Takumi Murakami, Yuichi Hongoh, Rina Shinjo, Takehiro Kamiya, Toru Fujiwara, Kiwamu Minamisawa, Naoaki Ono, Shigehiko Kanaya, Yusuke Saijo

The paper examines how soil nutrition affects the root-associated microbiome of rice across seasons and conditions, finding nitrogen-fixing bacteria dominate in non-fertilized fields and a machine learning model can predict soil fertilization status from microbiome data.

Plant and Cell Physiology · May 21, 2025Peer-reviewedPlant Biology

Biocontrol of bacterial wilt disease using plant-associated bacterial communities in tomato

Eriko Tanaka, Daisuke Umeki, Shota Kido, Rikako Makishima, Yuko Tamaki, Takumi Murakami, Masayuki Fujiwara, Yusuke Saijo

This study constructs a bacterial wilt-suppressive synthetic community in tomato that reduces disease under axenic and soil conditions by enhancing plant defense mechanisms.

Molecular Plant-Microbe Interactions · Jan 1, 2025Peer-reviewedPlant Biology