Author
Fraunhofer Institute for Algorithms and Scientific ComputingORCID 0000-0002-5001-7471Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
5 papers
Recent·Most cited
Josep Marín-Llaó, Sarah Mubeen, Alexandre Perera-Lluna…·Daniel Domingo‐Fernándéz
The paper introduces MultiPaths, a Python framework for analyzing multi-layer biological networks using diffusion algorithms, showing improved predictive performance through integrated multi-omics data.
Daniel Domingo‐Fernándéz, Sarah Mubeen, Josep Marín-Llaó…·Martin Hofmann‐Apitius
PathMe harmonizes three pathway databases into a unified schema to enable comprehensive exploration of pathway crosstalk and consensus.
Charles Tapley Hoyt, Daniel Domingo‐Fernándéz, Sarah Mubeen…·Martin Hofmann‐Apitius
The paper introduces Bio2BEL, a set of Python packages that convert multi-modal biological data into Biological Expression Language for integration and analysis.
Daniel Domingo‐Fernándéz, Allison C. Provost, Alpha Tom Kodamullil…·Magali Haas
The PTSD Biomarker Database compiles over 900 PTSD biomarkers from 109 studies to enable exploration and comparison of biomarker findings through interactive visualizations.
Daniel Domingo‐Fernándéz, Charles Tapley Hoyt, Carlos Bobis-Álvarez…·Martin Hofmann‐Apitius
ComPath curates pathway mappings between databases and provides tools for exploring and analyzing pathway knowledge, demonstrating its utility in identifying biological insights in Parkinson's disease.