Author

Giovanni Manzini

Università degli Studi del Piemonte Orientale “Amedeo Avogadro”ORCID 0000-0002-5047-0196Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2

Frequent Co-Authors

Alan KuhnleiD· 2 shared Ben LangmeadiD· 2 shared Christina A. BoucheriD· 2 shared Taher MuniD· 2 shared Travis GagieiD· 2 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 10 mutual co-author links

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2 shared papersBioinformatics

Alan KuhnleORCID

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2 papers

Recent·Most cited

BioinformaticsJournal of Computational BiologyPeer-reviewedMar 17, 2020

Efficient Construction of a Complete Index for Pan-Genomics Read Alignment

Alan Kuhnle, Taher Mun, Christina A. Boucher…·Giovanni Manzini

The paper introduces an efficient method for constructing a complete index for pan-genomics read alignment, improving memory and time efficiency over existing methods.

DOI 10.1089/cmb.2019.0309

humanwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsAlgorithms for Molecular BiologyPeer-reviewedMay 24, 2019

Prefix-Free Parsing for Building Big BWTs

Christina A. Boucher, Travis Gagie, Alan Kuhnle…·Taher Mun

The paper introduces a preprocessing algorithm called prefix-free parsing to efficiently build compressed Burrows-Wheeler Transform indexes for large genomic datasets.

72 citations

humanwhole-genome sequencing

𝕏 PostBluesky