Author

Małgorzata Chwalińska

University of WarsawORCID 0000-0002-5065-1608Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Anna KarnkowskaiD· 1 shared Fabrice NotiD· 1 shared Michał KarlickiiD· 1 shared Sarah RomaciD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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1 shared paperEcology

Anna KarnkowskaORCID

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1 paper

Recent·Most cited

From short to long reads: enhanced protist diversity profiling via Nanopore metabarcoding

Małgorzata Chwalińska, Michał Karlicki, Sarah Romac, Fabrice Not, Anna Karnkowska

This paper introduces BaNaNA, a pipeline for generating high-quality OTUs from Nanopore long-read sequencing data, showing its effectiveness for protist biodiversity studies and its advantages over short-read methods.

Metabarcoding and Metagenomics · Oct 8, 2025Peer-reviewedEcology