St2cell: Reconstruction of in situ single-cell spatial transcriptomics by integrating high-resolution histological image.
Siyu Hou, Kuan Tian, Sen Yang, Jinxi Xiang, Wei Yang, Jun Zhang, Xiao Han
St2cell reconstructs in situ single-cell spatial transcriptomics by integrating high-resolution histological images with deep learning and convex quadratic programming.
bioRxiv · Oct 13, 2022 · PreprintBioinformatics