Pingchuan Li

Integrated pangenome and population genomics reveal selection on standing genetic variation driving fiber flax-linseed divergence

This study identifies selection on standing genetic variation driving divergence between fiber flax and linseed using pangenome and population genomic analyses.

Genomic selection for seed yield enhances flax breeding efficiency

This study demonstrates that genomic selection improves flax breeding efficiency by reducing field testing costs and enhancing prediction accuracy for seed yield.

Near telomere-to-telomere Linum genomes reveal a lineage-specific DNA transposon associated with chromosome architecture remodeling

The paper generates near telomere-to-telomere genomes for Linum species to study chromosome evolution, finding lineage-specific DNA transposon expansion linked to pericentromeric restructuring.

MultiGS: A comprehensive and user-friendly genomic prediction platform Integrating statistical, machine learning, and deep learning models for breeders

MultiGS is a genomic prediction platform that integrates various models for breeders, showing improved accuracy and efficiency in different prediction scenarios.

PHASIS: A computational suite for de novo discovery and characterization of phased, siRNA-generating loci and their miRNA triggers

PHASIS is a computational tool for discovering and characterizing phased siRNA-generating loci and their miRNA triggers, with high sensitivity and scalability.