Author

Sandra M. Mathioni

Donald Danforth Plant Science CenterORCID 0000-0002-8853-4108Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:deconvolution· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:metagenomics· 1

Frequent Co-Authors

Atul KakranaiD· 2 shared Blake C. MeyersiD· 2 shared Deepti AnandiD· 1 shared Finn HartmanniD· 1 shared Karina van der LindeiD· 1 shared Parth PateliD· 1 shared Pingchuan LiiD· 1 shared Reza K. HammondiD· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersPlant Biology

Atul KakranaORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Plant BiologyBMC Plant BiologyPeer-reviewedJul 8, 2026

A multi-omics approach to maize (Zea mays) tassel development

Finn Hartmann, Sandra M. Mathioni, Atul Kakrana…·Karina van der Linde

The paper profiles transcriptomes, small RNAs, and proteomes in maize tassels at four stages to understand gene regulation during development and identify miRNAs involved in hormone signaling and anther differentiation.

DOI 10.1186/s12870-026-09413-w

zebrafishbulk RNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 3, 2017

PHASIS: A computational suite for de novo discovery and characterization of phased, siRNA-generating loci and their miRNA triggers

Atul Kakrana, Pingchuan Li, Parth Patel…·Blake C. Meyers

PHASIS is a computational tool for discovering and characterizing phased siRNA-generating loci and their miRNA triggers, with high sensitivity and scalability.

28 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky