Author

Ryan O’Rourke

Broad InstituteORCID 0000-0002-5193-6568Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Pratiti BandopadhayayiD· 2 shared Rameen BeroukhimiD· 2 shared Anthony J. GarrityiD· 1 shared Chad NusbaumiD· 1 shared Cheng‐Zhong ZhangiD· 1 shared Chip StewartiD· 1 shared Cory M. JohannesseniD· 1 shared David Feldman· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersGenomics

Pratiti BandopadhayayORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 9, 2019

CloneRetriever: retrieval of rare clones from heterogeneous cell populations

David Feldman, FuNien Tsai, Anthony J. Garrity…·Paul C. Blainey

CloneRetriever identifies and retrieves rare clones from heterogeneous populations to study clonal fitness and selection mechanisms.

2 citations

experimental assay

𝕏 PostBluesky

GenomicsGenome ResearchPeer-reviewedApr 1, 2018

Genome-wide detection of structural variants and indels by local assembly

Jeremiah A. Wala, Pratiti Bandopadhayay, Noah F. Greenwald…·Rameen Beroukhim

SvABA detects structural variants and indels using genome-wide local assembly, showing improved sensitivity and specificity, especially for small variants and complex rearrangements in cancer genomes.

444 citations

humanwhole-genome sequencing

𝕏 PostBluesky