Author

Cristian Caranica

Northeastern UniversityORCID 0000-0002-5306-4812Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Organism:human· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Mingyang LuiD· 2 shared Guohao DaiiD· 1 shared YUKAI YOUiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

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2 shared papersSystems Biology

Mingyang LuORCID

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2 papers

Recent·Most cited

Building dynamical models of multi-step state transitions from single cell gene expression trajectories

YUKAI YOU, Cristian Caranica, Guohao Dai, Mingyang Lu

This paper introduces NetDes, a method to infer gene regulatory networks and build dynamical models from single-cell gene expression data, showing its effectiveness in reconstructing cell state transitions.

bioRxiv · Sep 17, 2026 · PreprintSystems Biology

A Data-Driven Optimization Method for Coarse-Graining Gene Regulatory Networks

Cristian Caranica, Mingyang Lu

This paper introduces SacoGraci, a data-driven method for coarse-graining large gene regulatory networks using ensemble-based modeling and MCMC optimization, demonstrating its effectiveness on synthetic and literature-based networks.

iScience · Jan 4, 2023Peer-reviewedSystems Biology