YUKAI YOU

Joint inference of paired dynamical gene regulatory networks reveals distinct cell-state landscapes of neutrophil reprogramming

The paper introduces NetDes-Duo, a method to jointly infer gene regulatory networks from scRNA-seq data, revealing distinct cell-state landscapes in neutrophil reprogramming under different conditions.

Building dynamical models of multi-step state transitions from single cell gene expression trajectories

This paper introduces NetDes, a method to infer gene regulatory networks and build dynamical models from single-cell gene expression data, showing its effectiveness in reconstructing cell state transitions.