Author

Martin Selinger

Umeå UniversityORCID 0000-0002-5420-9702Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:CRISPR screen· 2 Approach:experimental assay· 2 Assay:ATAC-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Johan HenrikssoniD· 2 shared Alicia Herrera Curbelo· 1 shared Davide CirilloiD· 1 shared Debojyoti DasiD· 1 shared Ellen BushelliD· 1 shared Iker Núñez‐CarpinteroiD· 1 shared Ionut Sebastian MihaiiD· 1 shared Iqra Nazir· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersMolecular Biology

Johan HenrikssonORCID

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3 papers

Recent·Most cited

A conserved transcriptional backbone and rewiring of gene-regulatory networks in activated human CD4⁺ T cells

Ionut Sebastian Mihai, Iker Núñez‐Carpintero, Davide Cirillo, Johan Trygg, Mattias N.E. Forsell, Martin Selinger

The paper identifies a conserved set of transcription factors in human CD4+ T cell subtypes and shows subtype-specific rewiring of gene regulatory networks during activation and differentiation.

bioRxiv · Nov 25, 2025 · PreprintImmunology

A scalable CRISPR-Cas9 gene editing system facilitates CRISPR screens in the malaria parasite Plasmodium berghei

Thorey K. Jonsdottir, Martina Soledad Paoletta, Takahiro Ishizaki, Sophia Raine C. Hernandez, Maria Ivanova, Alicia Herrera Curbelo, Paulina Avovome Saiki, Martin Selinger, Debojyoti Das, Johan Henriksson, Ellen Bushell

The paper develops a scalable CRISPR-Cas9 system for Plasmodium berghei to enable genome-wide knockout screens.

Nucleic Acids Research · Jan 9, 2025Peer-reviewedMolecular Biology

CRISPR-MIP replaces PCR and reveals GC and oversampling bias in pooled CRISPR screens

Martin Selinger, Iryna Yakovenko, Iqra Nazir, Johan Henriksson

CRISPR-MIP replaces PCR for sgRNA quantification, revealing GC and oversampling biases in pooled CRISPR screens.

bioRxiv · Mar 28, 2024 · PreprintMolecular Biology