Author

Andrey I. Aristov

Institut PasteurORCID 0000-0002-5675-7729Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Assay:imaging· 2 Organism:bacteria (other)· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

Charles Naim BaroudiD· 3 shared Sébastien SartiD· 2 shared Clara DelahousseiD· 1 shared Elric EspositoiD· 1 shared Erik MaikranziD· 1 shared Gustave RonteixiD· 1 shared Jack‐Christophe CosseciD· 1 shared Jeremie Sobel· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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3 shared papersBioengineering

Charles Naim BaroudORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Extending digital biology: bacterial survival and morphological heterogeneity under antibiotic stress

Erik Maikranz, Andrey I. Aristov, Lena Le Quellec, Charles Naim Baroud

This study develops a workflow to generate morphological signatures of bacterial progeny under antibiotic stress, revealing distinct morphologies linked to survival and antibiotic type.

iScience · Oct 31, 2026Peer-reviewedBioengineering

Culture of pluripotent stem cells in microscale droplets modulates differentiation and tissue patterning towards organoids on chip

Nadia Vertti‐Quintero, Clara Delahousse, Andrey I. Aristov, Tatiana Traboulsi, Jack‐Christophe Cossec, Charles Naim Baroud, Sébastien Sart

This study shows that culturing pluripotent stem cells in microscale droplets promotes differentiation into three germ layers and organoid formation, with enhanced tissue patterning and self-organization.

Stem Cell Research & Therapy · Sep 26, 2025Peer-reviewedBioengineering

Griottes: a generalist tool for network generation from segmented tissue images

Gustave Ronteix, Andrey I. Aristov, Valentin Bonnet, Sébastien Sart, Jeremie Sobel, Elric Esposito, Charles Naim Baroud

Griottes generates network representations of segmented tissue images to extract cell interactions and properties efficiently.

BMC Biology · Aug 11, 2022Peer-reviewedBioinformatics