The Tangent copy-number inference pipeline for cancer genome analyses
Barbara Tabak, Gordon Saksena, Coyin Oh, Galen F. Gao, Barbara Hill Meyers, Michael M. Reich, Steven E. Schumacher, Lindsay C. Westlake, Ashton C. Berger, Scott L. Carter, Andrew D. Cherniack, Matthew M. Meyerson, Rameen Beroukhim, Gad A. Getz
The paper introduces Tangent and Pseudo-Tangent pipelines for copy-number inference from cancer genome data, improving noise reduction and accuracy in SNP array and WES analyses.
bioRxiv · Mar 5, 2019 · PreprintBioinformatics