A pan-cancer atlas of transcriptional dependence on DNA methylation and copy number aberrations
Christian Fougner, Elen Höglander, Tonje Gulbrandsen Lien…·Ole Christian Lingjærde
The paper constructs a pan-cancer atlas showing how DNA methylation and copy number aberrations influence gene expression across cancers, finding that copy number changes drive heterogeneity and expression-methylation links are often due to cell-of-origin and normal cell mix.