Author

Blair M. Lyons

Allen Institute for Cell ScienceORCID 0000-0002-6038-6035Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:simulation· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Daniel R. BergmaniD· 1 shared Graham T. JohnsoniD· 1 shared Grant Waldow· 1 shared Heber Lima da RochaiD· 1 shared Jessica S. YuiD· 1 shared Julie A. Cass· 1 shared Julie A. TheriotiD· 1 shared Marco RusconeiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Daniel R. BergmanORCID

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2 papers

Recent·Most cited

4D hybrid model interrogates agent-level rules and parameters driving hiPS cell colony dynamics

Jessica S. Yu, Blair M. Lyons, Susanne M. Rafelski, Julie A. Theriot, Neda Bagheri, Graham T. Johnson

The paper develops a hybrid agent-based model to simulate hiPS cell colony dynamics, identifies limitations of the CPM approach, and suggests improvements for accurate simulations.

bioRxiv · Aug 12, 2024 · PreprintSystems Biology

PhysiCell Studio: a graphical tool to make agent-based modeling more accessible

Randy W. Heiland, Daniel R. Bergman, Blair M. Lyons, Grant Waldow, Julie A. Cass, Heber Lima da Rocha, Marco Ruscone, Vincent Noël, Paul Macklin

PhysiCell Studio is a graphical tool that simplifies the creation and editing of multicellular models by providing a user-friendly interface for XML-based model definition.

Gigabyte · Jun 19, 2024Peer-reviewedBioinformatics