Author

Katie Saund

University of MichiganORCID 0000-0002-6214-6713Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:GWAS / association mapping· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

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Ali Mohammed PiraniiD· 1 shared Evan S. SnitkiniD· 1 shared Stephanie N. ThiedeiD· 1 shared Zena LappiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

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4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Ali Mohammed PiraniORCID

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1 paper

Recent·Most cited

BioinformaticsMicrobial GenomicsPeer-reviewedApr 20, 2020

prewas: Data pre-processing for more informative bacterial GWAS

Katie Saund, Zena Lapp, Stephanie N. Thiede…·Evan S. Snitkin

This paper introduces prewas, an R package that standardizes variant pre-processing for bacterial GWAS to improve reproducibility and interpretability of results.

19 citations

bacteria (other)whole-genome sequencing

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