Author

Ramón E. Rivera‐Vicéns

Ludwig-Maximilians-Universität MünchenORCID 0000-0002-6229-3537Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:non-human primate· 1 Organism:plant (other)· 1

Frequent Co-Authors

Gert WörheideiD· 2 shared Michael EiteliD· 2 shared Alok AruniD· 1 shared Ashley Scoles· 1 shared Catalina A. García‐EscuderoiD· 1 shared Christina Johne· 1 shared Coralys Colón· 1 shared Gabrielle Büttner· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Gert WörheideORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

MicrobiologyFrontiers in MicrobiologyPeer-reviewedOct 6, 2026

Genomic Insights into Bacterial Communities of Coenocytic Algae Using Metagenome Assembled Genomes

Gerardo Laureano, Xochitl Ramirez, Ashley Scoles…·Alok Arun

This study analyzes bacterial communities in coenocytic algae using metagenome-assembled genomes, finding high dominance of Pseudomonadota and unique biosynthetic gene clusters in coenocytic MAGs.

DOI 10.3389/fmicb.2026.1851259

plant (other)metagenomics

𝕏 PostBluesky

GenomicsbioRxivPreprintAug 12, 2022

rRNA depletion for holobiont metatranscriptome profiling across demosponges

Sergio Vargas, Ramón E. Rivera‐Vicéns, Michael Eitel…·Gert Wörheide

The paper introduces a hybrid-capture strategy for rRNA depletion in demosponge metatranscriptomes to better study host-microbe interactions.

DOI 10.1101/2022.08.12.503726

metagenomicsexperimental assay

𝕏 PostBluesky

BioinformaticsMolecular Ecology ResourcesPeer-reviewedFeb 4, 2022

TransPi - a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly

Ramón E. Rivera‐Vicéns, Catalina A. García‐Escudero, Nicola Conci…·Gert Wörheide

TransPi improves de novo transcriptome assembly for non-model organisms by combining multiple assemblers and reducing errors, achieving higher BUSCO completeness and lower duplication rates.

45 citations

non-human primatebulk RNA-seq

𝕏 PostBluesky