Author

Melissa A. Krueger

Oregon Health & Science UniversityORCID 0000-0002-6276-3463Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexander B. Carvidi· 1 shared Alexandra M. WileyiD· 1 shared Andrew GrossiD· 1 shared Dmitry RychkoviD· 1 shared Eric A. EvangelistaiD· 1 shared Jessica A NeelyiD· 1 shared Joanne NitithamiD· 1 shared Judith F. AshouriiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Alexander B. Carvidi

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintMar 31, 2026

Transcriptional landscape of cardiac-specific Gpx4 deletion recapitulates human cardiomyopathy

Alexandra M. Wiley, Xiaoyun Guo, Yu Chen…·Rheem A. Totah

This study examines the transcriptional effects of cardiac-specific Gpx4 deletion in mice and compares them to human cardiomyopathy, identifying ferroptosis-related pathways involved in heart disease.

DOI 10.64898/2026.03.27.714934

mousebulk RNA-seq

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BioinformaticsFrontiers in ImmunologyPeer-reviewedJun 8, 2021

Cross-Tissue Transcriptomic Analysis Leveraging Machine Learning Approaches Identifies New Biomarkers for Rheumatoid Arthritis

Dmitry Rychkov, Jessica A Neely, Tomiko Oskotsky…·Marina Sirota

This paper identifies 13 biomarkers for rheumatoid arthritis using cross-tissue transcriptomic data and machine learning, validated across multiple datasets and showing clinical utility.

47 citationstop 3%

humanbulk RNA-seq

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