Author

Qi Mao

ORCID 0000-0002-6337-1568Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Research Focus:development & morphogenesis· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Cole TrapnelliD· 2 shared Li WangiD· 2 shared Xiaojie QiuiD· 2 shared Arman Rahimzamani· 1 shared Bingcheng Ren· 1 shared Hannah A. PlineriD· 1 shared José L. McFaline‐FigueroaiD· 1 shared Lauren M. SaundersiD· 1 shared

Activity by Year

2017-2020 · peak 1/yr

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10 top collaborators · 35 mutual co-author links

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2 shared papersGenomics

Cole TrapnellORCID

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2 papers

Recent·Most cited

GenomicsCell SystemsPeer-reviewedMar 1, 2020

Towards inferring causal gene regulatory networks from single cell expression measurements

Xiaojie Qiu, Arman Rahimzamani, Li Wang…·Sreeram Kannan

This paper introduces Scribe, a toolkit for causal gene regulatory network inference from single-cell data, showing that pseudotime data performs worse than true time series data.

185 citationstop 1%

scRNA-seqstatistical model

𝕏 PostBluesky

GenomicsNature MethodsPeer-reviewedAug 21, 2017

✦ In-depth digest

Reversed graph embedding resolves complex single-cell developmental trajectories

Xiaojie Qiu, Qi Mao, Ying Tang…·Cole Trapnell

Monocle 2 learns branched single-cell trajectories without supervision via reversed graph embedding, revealing a non-fusing myoblast outcome and knockout myeloid cells diverted onto opposite fate branches.

5,073 citationstop 1%

humanmouse

𝕏 PostBluesky