Author

Carlo A. Biagi

Fisheries and Oceans CanadaORCID 0000-0002-6345-9674Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Assay:whole-genome sequencing· 4 Research Focus:GWAS / association mapping· 2 Organism:human· 2 Research Focus:variant calling· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:development & morphogenesis· 1 Organism:multiple species· 1

Frequent Co-Authors

Ben F. KoopiD· 4 shared Dionne Sakhrani· 4 shared Kris A. ChristenseniD· 4 shared Robert H. DevliniD· 4 shared Ruth E. WithleriD· 4 shared Terry D. BeachamiD· 3 shared Anne‐Marie Flores· 2 shared Cody A Despins· 2 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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4 shared papersGenomics

Ben F. KoopORCID

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4 papers

Recent·Most cited

Revealing the evolutionary history and contemporary population structure of Pacific salmon in the Fraser River through genome resequencing

Kris A. Christensen, Anne‐Marie Flores, Dionne Sakhrani, Carlo A. Biagi, Robert H. Devlin, Ben J. G. Sutherland, Ruth E. Withler, Eric B Rondeau, Ben F. Koop

This study uses genome resequencing to analyze the evolutionary history and population structure of Fraser River salmon, identifying genetic groups, adaptive loci, and factors influencing their distribution.

G3 Genes Genomes Genetics · Jul 23, 2024Peer-reviewedEvolutionary Biology

Isolation-by-distance and population-size history inferences from the coho salmon (Oncorhynchus kisutch) genome

Eric B Rondeau, Kris A. Christensen, David R. Minkley, Jong S. Leong, Michelle T. T. Chan, Cody A Despins, Anita Mueller, Dionne Sakhrani, Carlo A. Biagi, Quentin Rougemont, Éric Normandeau, Steven J.M. Jones, Robert H. Devlin, Ruth E. Withler, Terry D. Beacham, , Ben F. Koop

The paper uses genome-wide data to infer isolation-by-distance and population size history in coho salmon, identifying genes associated with latitude and potential osmoregulation roles.

G3 Genes Genomes Genetics · Feb 9, 2023Peer-reviewedGenomics

Genome assembly, transcriptome and SNP database for chum salmon (Oncorhynchus keta)

Eric B. Rondeau, Kris A. Christensen, Dionne Sakhrani, Carlo A. Biagi, Mike Wetklo, Hollie Johnson, Cody A Despins, Rosalind A. Leggatt, David R. Minkley, Ruth E. Withler, Terry D. Beacham, Ben F. Koop, Robert H. Devlin

This paper generates a reference genome and SNP database for chum salmon, identifies geographic genetic variation, and links SNPs to phenotypic sex.

bioRxiv · Dec 27, 2021 · PreprintGenomics

The pink salmon genome: uncovering the genomic consequences of a strict two-year life-cycle

Kris A. Christensen, Eric B. Rondeau, Dionne Sakhrani, Carlo A. Biagi, Hollie Johnson, Jay Joshi, Anne‐Marie Flores, Sreeja Leelakumari, Richard A. Moore, Pawan K. Pandoh, Ruth E. Withler, Terry D. Beacham, Rosalind A. Leggatt, Carolyn M. Tarpey, Lisa Wishard Seeb, , Ben F. Koop

The paper analyzes the pink salmon genome to identify genomic consequences of a two-year life-cycle, finding Fst peaks and gene regions associated with temporal isolation and selection.

PLoS ONE · Dec 17, 2021Peer-reviewedGenomics