Quentin Rougemont

The paper identifies genomic architectures associated with parasitism loss in lampreys, showing distinct genomic features across different ecotypes and highlighting independent evolutionary paths.

EASYstrata is a workflow for genome annotation and divergence analysis that detects recombination suppression and its effects, validated on fungal, plant, and animal genomes.

The paper identifies a locus on the X chromosome in Cannabis sativa that contains three genes potentially controlling sex determination, with distinct expression patterns across monoecious and dioecious plants.

The paper shows that HD mating-type genes have lost function in three Microbotryum species, with PR genes controlling mating compatibility, and reports evolutionary strata from recombination suppression.

This study sequences the giant Y chromosome of Silene latifolia and reveals its structure, function, and evolutionary history.

The paper identifies a non-recombining genomic region in the invasive fungus Cryphonectria parasitica linked to the mating-type locus, showing balanced haplotype segregation and potential adaptation through mobile elements.

The paper uses genome-wide data to infer isolation-by-distance and population size history in coho salmon, identifying genes associated with latitude and potential osmoregulation roles.

This study shows that copy number variants (CNVs) better reveal genotype-temperature associations than SNPs in American lobster populations.

This study shows that standing genetic variation and chromosomal rearrangements contribute to local adaptation in capelin despite high gene flow.