Author

Pauline L. Kamath

University of MaineORCID 0000-0002-6458-4514Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:clustering· 1 Research Focus:database / resource· 1 Assay:long-read sequencing· 1 Organism:plant (other)· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Allan Phillips· 1 shared Christopher L. DupontiD· 1 shared Gene S. TaniD· 1 shared Josh L. EspinozaiD· 1 shared Karen G. LloydiD· 1 shared Melanie B. PrenticeiD· 1 shared Nicholas J. Schiraldi· 1 shared Spencer A. BruceiD· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Allan Phillips

Mutual co-authors in cluster

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2 papers

Recent·Most cited

BioinformaticsNucleic Acids ResearchPeer-reviewedJun 11, 2024

Unveiling the Microbial Realm with VEBA 2.0: A modular bioinformatics suite for end-to-end genome-resolved prokaryotic, (micro)eukaryotic, and viral multi-omics from either short- or long-read sequencing

Josh L. Espinoza, Allan Phillips, Melanie B. Prentice…·Christopher L. Dupont

VEBA 2.0 is a modular bioinformatics suite that enables genome-resolved analysis of prokaryotes, microeukaryotes, and viruses from short- or long-read sequencing data, with applications in diverse environments.

23 citations

bacteria (other)virus

𝕏 PostBluesky

GenomicsEvolutionary ApplicationsPeer-reviewedDec 23, 2019

A classification framework for Bacillus anthracis defined by global genomic structure

Spencer A. Bruce, Nicholas J. Schiraldi, Pauline L. Kamath…·Wendy C. Turner

This study develops a high-resolution genotyping framework for Bacillus anthracis using whole-genome sequences of over 350 isolates, revealing geographic lineage distribution and plasmid structure consistency with chromosomal population structure.

24 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky