Author

Shiva Abbasi

The University of Texas at ArlingtonORCID 0000-0002-6470-335XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2

Signature Assays, Organisms & Methods

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Organism:Drosophila· 2 Research Focus:gene regulatory network inference· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Priyanshi BoradiD· 2 shared Theodora KoromilaiD· 2 shared Evangelia Chrysostomou· 1 shared Fan GaoiD· 1 shared George Charitos· 1 shared Kelli D. FeneloniD· 1 shared Lior S. PachteriD· 1 shared Panagiotis Apostolidis· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersDevelopmental Biology

Priyanshi BoradORCID

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2 papers

Recent·Most cited

Balancing precision with plasticity: Redefining the roles of transcription factors in early cell fate specification

Shiva Abbasi, Sijie Li, George Charitos, Evangelia Chrysostomou, Wenjiang Zhou, Panagiotis Apostolidis, Priyanshi Borad, Peng He, Theodora Koromila

This study identifies two classes of regulatory elements in Drosophila embryos that govern early gene expression, revealing distinct roles for pioneer factors in initiating and maintaining transcriptional activity.

bioRxiv · Feb 11, 2025 · PreprintDevelopmental Biology

Cell-specific occupancy dynamics between the pioneer-like factor Opa/ZIC and Ocelliles/OTX regulate early head development in embryos

Kelli D. Fenelon, Fan Gao, Priyanshi Borad, Shiva Abbasi, Lior S. Pachter, Theodora Koromila

The paper investigates the dynamic interaction between Opa/ZIC and Oc/OTX in regulating head development, finding that Opa and Oc compete for gene regulation in different developmental stages.

bioRxiv · Dec 15, 2022 · PreprintDevelopmental Biology