Author

Guangtu Gao

Agricultural Research ServiceORCID 0000-0002-6500-8164Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Organism:non-human primate· 3 Assay:whole-genome sequencing· 3 Research Focus:variant calling· 2 Assay:bulk RNA-seq· 1 Research Focus:genome assembly· 1 Research Focus:GWAS / association mapping· 1 Organism:rat· 1

Frequent Co-Authors

Yniv PaltiiD· 4 shared Brian E. ScheffleriD· 2 shared Geoffrey C. WaldbieseriD· 2 shared Ramey C. YoungbloodiD· 2 shared Ali AliiD· 1 shared Audrey Dehaullon· 1 shared Brett Kenney· 1 shared Brian C. PetersoniD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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4 shared papersGenomics

Yniv PaltiORCID

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4 papers

Recent·Most cited

GenomicsG3 Genes Genomes GeneticsPeer-reviewedJun 19, 2023

The generation of the first chromosome-level de-novo genome assembly and the development and validation of a 50K SNP array for North American Atlantic salmon

Guangtu Gao, Geoffrey C. Waldbieser, Ramey C. Youngblood…·Yniv Palti

The paper generates a chromosome-level de-novo genome assembly and develops a 50K SNP array for North American Atlantic salmon, revealing karyotype differences due to chromosomal fissions and fusions.

28 citationstop 4%

non-human primatewhole-genome sequencing

𝕏 PostBluesky

GenomicsFrontiers in GeneticsPeer-reviewedJul 18, 2022

Development of a high-density 665 K SNP array for rainbow trout genome-wide genotyping

Maria Bernard, Audrey Dehaullon, Guangtu Gao…·Florence Phocas

The paper develops a high-density 665 K SNP array for rainbow trout and demonstrates its utility in detecting linkage disequilibrium at shorter genomic distances.

29 citations

non-human primatewhole-genome sequencing

𝕏 PostBluesky

GenomicsG3 Genes Genomes GeneticsPeer-reviewedFeb 22, 2021

A long reads-based de-novo assembly of the genome of the Arlee homozygous line reveals structural genome variation in rainbow trout

Guangtu Gao, Susana Magadán, Geoffrey C. Waldbieser…·Yniv Palti

The paper presents a de-novo genome assembly of the Arlee homozygous rainbow trout line using long-read sequencing and scaffolding, revealing structural variations and improving gene annotation.

79 citationstop 4%

ratwhole-genome sequencing

𝕏 PostBluesky

GenomicsFrontiers in GeneticsPeer-reviewedSep 19, 2018

Genome-wide association analysis with a 50K transcribed gene SNP-chip identifies QTL affecting muscle yield in rainbow trout

Mohamed Salem, Rafet Al-Tobasei, Ali Ali…·Timothy D. Leeds

The paper identifies QTL affecting muscle yield in rainbow trout using a 50K transcribed gene SNP-chip, finding larger genetic variance explained compared to previous studies.

55 citations

non-human primatebulk RNA-seq

𝕏 PostBluesky