Evaluating Cross-Platform Batch Correction Methods for Integrated Microarray and RNA-seq Data Analysis
Xuejun Sun, Yu Zhang, Chuwen Liu, Xiaojing Zheng, Fei Zou
This study evaluates batch correction methods for integrating microarray and RNA-seq data, finding that limma provides the best balance of Type I error control and power for differential expression analysis.
bioRxiv · Sep 30, 2024 · PreprintGenetics