Author

Ilhem Boutiba-Ben Boubaker

Hôpital Charles-NicolleORCID 0000-0002-6590-2406Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:bacteria (other)· 2 Assay:whole-genome sequencing· 2 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Asma FerjaniiD· 2 shared Dana ItaniiD· 2 shared Ebenezer Foster-NyarkoiD· 2 shared Lamia KanzariiD· 2 shared Sana FerjaniiD· 2 shared Aasmund FostervoldiD· 1 shared Adam W. J. JenneyiD· 1 shared Adane MihretiD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersMicrobiology

Asma FerjaniORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Ciprofloxacin resistance in Klebsiella pneumoniae: phenotype prediction from genotype and global distribution of resistance determinants

Kara K. Tsang, Iana Amke, David M. Aanensen, Jabir A. Abdulahi, Alexander Michael Aiken, Michael A. Bachman, Stephen G. Baker, Katherine Barry, Gherard Batisti Biffignandi, Emília Maria Medeiros de Andrade Belitardo, Iván Bloise, Ilhem Boutiba-Ben Boubaker, Chanté Fortuin, Sylvain Brisse, Susana G. Campino, , Carla Rodrigues

The paper develops a rules-based classifier to predict ciprofloxacin resistance in Klebsiella pneumoniae from genotype data and demonstrates its global distribution association with quinolone consumption.

Genome Medicine · Oct 27, 2026Peer-reviewedGenomics

Impact of methicillin resistance on virulence factor expression in 1 Staphylococcus aureus: Insights from gene expression profiling

Charfeddine Gharsallah, Asma Ferjani, Mouna Ghariani, Sana Ferjani, Lamia Kanzari, Amel Rehaiem, Ahmed Fakhfakh, Ilhem Boutiba-Ben Boubaker

This study examines the relationship between methicillin resistance and virulence factor expression in Staphylococcus aureus strains using gene expression profiling.

bioRxiv · Oct 19, 2024 · PreprintMicrobiology

Whole Genome Sequencing Analysis of a Recent Multi-Drug Resistant Shigella sonnei Outbreak Among Tunisian Children

Sana Ferjani, Lamia Kanzari, Zaineb Hamzaoui, Laila Jomni, Asma Ferjani, Ahmed Fakhfekh, Olfa Bahri, Wafa Achour, Meriam Zribi, Sameh Trabelsi, Nissaf Ben Alya, Dana Itani, Safa Bouwazra, Ebenezer Foster-Nyarko, Ilhem Boutiba-Ben Boubaker

The paper analyzes whole genome sequencing data from a multidrug-resistant Shigella sonnei outbreak in Tunisia, identifying resistance genes and genetic relationships with European strains.

bioRxiv · Aug 12, 2024 · PreprintGenomics