Author

Nina Blazeska

La Jolla Institute for ImmunologyORCID 0000-0002-6604-0019Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Approach:deep learning· 1 Approach:machine learning (classical)· 1 Assay:proteomics· 1 Approach:statistical model· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Bjoern PetersiD· 3 shared Randi VitaiD· 3 shared Alessandro SetteiD· 2 shared Eve RichardsoniD· 2 shared Jason GreenbaumiD· 2 shared Aurélien F. A. MoumbockiD· 1 shared Blake Harlan· 1 shared Brian CorrieiD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersBioinformatics

Bjoern PetersORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJun 6, 2026

Revised Adaptive Immune Receptor Data in the Immune Epitope Database

Lonneke Scheffer, Eve Richardson, Randi Vita…·Bjoern Peters

The paper revises the standardization and validation pipeline for immune receptor data in the IEDB to improve data consistency and usability.

1 citation

proteomicsstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 9, 2026

Curation at Scale with EPITOME: Extraction Pipeline for Immunological Texts and Open-Source Multimodal Enquiry

Eve Richardson, Parker Lischwe, Jason Bennett…·Bjoern Peters

EPITOME is a multimodal pipeline that combines OCR, text matching, and VLMs to automate and enhance epitope data curation from scientific papers.

DOI 10.64898/2026.01.08.698331

deep learningtransformer / foundation model

𝕏 PostBluesky

BioinformaticsPLoS Computational BiologyPeer-reviewedFeb 18, 2022

Towards the prediction of non-peptidic epitopes

Paul F. Zierep, Randi Vita, Nina Blazeska…·Stefan Günther

This paper presents a method to predict epitope activity of non-peptidic compounds using machine learning and the IEDB database, achieving ROC-AUC values between 0.69-0.96.

2 citations

machine learning (classical)

𝕏 PostBluesky