Author

Beau Schaeffer

Harvard UniversityORCID 0000-0002-6606-7721Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Bradford P. TayloriD· 1 shared Jacquelyn TurcinoviciD· 1 shared John H. ConnoriD· 1 shared Léa CavalliiD· 1 shared William Paul HanageiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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1 shared paperGenomics

Bradford P. TaylorORCID

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1 paper

Recent·Most cited

GenomicsMicrobial GenomicsPeer-reviewedSep 7, 2026

SARS-CoV-2 Intra-host Variation Shows Evidence of Transmission and Convergent Evolution in a University Surveillance Cohort

Léa Cavalli, Bradford P. Taylor, Beau Schaeffer…·William Paul Hanage

The paper analyzes SARS-CoV-2 intra-host variation in a university cohort to infer transmission events and assess within-host evolution, finding limited transmission of variants and evidence of positive selection at a recurrent site.

DOI 10.1099/mgen.0.001784

humanwhole-genome sequencing

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