Author

Alessandro Formaggioni

University of BolognaORCID 0000-0002-6624-9955Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:clustering· 2 Assay:DNA methylation· 2 Organism:human· 2 Organism:mouse· 2 Research Focus:phylogenetics / evolution· 2 Organism:rat· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1

Frequent Co-Authors

Alexander W. Clarke· 1 shared Alexandra Pierce· 1 shared Anju Angelina HembromiD· 1 shared Bastian FrommiD· 1 shared Charles Wu· 1 shared Eirik HøyeiD· 1 shared Eivind J. HovigiD· 1 shared Federico PlazziiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperEvolutionary Biology

Alexander W. Clarke

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Evidence of convergent evolution in the nuclear and mitochondrial OXPHOS subunits across the deep lineages of Squamata

Oscar Wallnoefer, Alessandro Formaggioni, Federico Plazzi, Marco Passamonti

This study identifies convergent evolution in OXPHOS subunits across snake and agamid lineages in Squamata, showing similar amino acid changes in both nuclear and mitochondrial genes.

Molecular Phylogenetics and Evolution · Apr 14, 2025Peer-reviewedEvolutionary Biology

MirGeneDB 3.0: Improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families, and updated covariance models.

Alexander W. Clarke, Eirik Høye, Anju Angelina Hembrom, Vanessa Molin Paynter, Jakob Vinther, Łukasz Wyrożemski, Inna Biryukova, Alessandro Formaggioni, Vladimir Y. Ovchinnikov, Holger Herlyn, Alexandra Pierce, Charles Wu, Morteza Aslanzadeh, Jeanne Chèneby, Pedro Martı́nez, , Bastian Fromm

MirGeneDB 3.0 updates the microRNA gene database with expanded species coverage, refined nomenclature, and improved covariance models for phylogenetic analysis.

Nucleic Acids Research · Nov 30, 2024Peer-reviewedEvolutionary Biology