Author

Eirik Høye

Oslo University HospitalORCID 0000-0002-9782-756XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 1 Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Organism:multiple species· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1

Frequent Co-Authors

Bastian FrommiD· 3 shared Marc R. FriedländeriD· 3 shared Eivind J. HovigiD· 2 shared Inna BiryukovaiD· 2 shared Kevin J. PetersoniD· 2 shared Michael HackenbergiD· 2 shared Morten Johansen· 2 shared Vladimir Y. OvchinnikoviD· 2 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 44 mutual co-author links

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3 shared papersEvolutionary Biology

Bastian FrommORCID

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3 papers

Recent·Most cited

MirGeneDB 3.0: Improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families, and updated covariance models.

Alexander W. Clarke, Eirik Høye, Anju Angelina Hembrom, Vanessa Molin Paynter, Jakob Vinther, Łukasz Wyrożemski, Inna Biryukova, Alessandro Formaggioni, Vladimir Y. Ovchinnikov, Holger Herlyn, Alexandra Pierce, Charles Wu, Morteza Aslanzadeh, Jeanne Chèneby, Pedro Martı́nez, , Bastian Fromm

MirGeneDB 3.0 updates the microRNA gene database with expanded species coverage, refined nomenclature, and improved covariance models for phylogenetic analysis.

Nucleic Acids Research · Nov 30, 2024Peer-reviewedEvolutionary Biology

MapToCleave: high-throughput profiling of microRNA biogenesis in living cells

Wenjing Kang, Bastian Fromm, Anna J.S. Houben, Eirik Høye, Daniela Bezdan, Carme Arnan, Kim Thrane, Michaela Asp, Rory Johnson, Inna Biryukova, Marc R. Friedländer

The paper introduces MapToCleave, a method to profile miRNA biogenesis in living cells, showing that stable lower basal stems enhance processing and expression across species.

Cell Reports · Nov 1, 2021Peer-reviewedMolecular Biology

MirGeneDB 2.0: The metazoan microRNA complement

Bastian Fromm, Diana Domańska, Eirik Høye, Vladimir Y. Ovchinnikov, Wenjing Kang, Ernesto Aparicio‐Puerta, Morten Johansen, Kjersti Flatmark, Anthony Mathelier, Eivind J. Hovig, Michael Hackenberg, Marc R. Friedländer, Kevin J. Peterson

MirGeneDB 2.0 expands curated microRNA gene annotations to 45 metazoan species, revealing many false positives and missing miRNAs in previous annotations.

Nucleic Acids Research · Oct 1, 2019Peer-reviewedGenomics