Author

José Luís Oliveira

University of AveiroORCID 0000-0002-6672-6176Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:protein structure· 1 Assay:proteomics· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Armando J. PinhoiD· 1 shared Diogo PratasiD· 1 shared Edgar D. Coelho· 1 shared Fernanda Brito CorreiaiD· 1 shared João Rafael AlmeidaiD· 1 shared Joel Perdiz ArraisiD· 1 shared Olga FajardaiD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 9 mutual co-author links

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1 shared paperBioinformatics

Armando J. PinhoORCID

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2 papers

Recent·Most cited

BioinformaticsSoftwareXPeer-reviewedJun 20, 2020

GTO: a toolkit to unify pipelines in genomic and proteomic research

João Rafael Almeida, Armando J. Pinho, José Luís Oliveira…·Diogo Pratas

GTO is a toolkit that unifies pipelines in genomic and proteomic research by combining specialized tools for data analysis, simulation, compression, and visualization.

16 citations

proteomicswhole-genome sequencing

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BioinformaticsBioMed Research InternationalPeer-reviewedOct 30, 2019

Handling Noise in Protein Interaction Networks

Fernanda Brito Correia, Edgar D. Coelho, José Luís Oliveira, Joel Perdiz Arrais

The paper introduces the Organization Measurement (OM) method to denoise protein interaction networks and predict missing links using network topology, achieving high AUC scores across yeast and human datasets.

8 citations

yeasthuman

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