Author

Nicolás Gaggion

Consejo Nacional de Investigaciones Científicas y TécnicasORCID 0000-0002-6684-5300Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Molecular Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:multiome· 1

Frequent Co-Authors

Federico ArieliD· 2 shared Martin D. CrespiiD· 2 shared Andrea BartaiD· 1 shared Camille Fonouni‐FardeiD· 1 shared Enzo FerranteiD· 1 shared Ezequiel PetrilloiD· 1 shared Federico Emanuel AballayiD· 1 shared Florencia S. RodrígueziD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersMolecular Biology

Federico ArielORCID

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2 papers

Recent·Most cited

ALTERNATIVE SPLICING OF A CODING GENE PRODUCES A NUCLEAR REGULATORY LONG NON-CODING RNA

Florencia S. Rodríguez, Pablo Mammi, Federico Emanuel Aballay, Loreana Pulichino, Rocío Soledad Tognacca, María Florencia Legascue, Nicolás Gaggion, Lucas Servi, Maria Kalyna, Andrea Barta, Federico Ariel, Martin D. Crespi, Ezequiel Petrillo

The paper shows alternative splicing generates regulatory lncRNAs from protein-coding genes in Arabidopsis, forming autoregulatory RNA-protein feedback loops under dark conditions.

bioRxiv · Apr 1, 2026 · PreprintMolecular Biology

What Large Language Models Know About Plant Molecular Biology

Manuel Fernandez Burda, Lucía Ferrero, Nicolás Gaggion, Camille Fonouni‐Farde, Martin D. Crespi, Federico Ariel, Enzo Ferrante

This paper benchmarks large language models in plant molecular biology using a new dataset, finding strong performance on multiple-choice questions but limitations in factual accuracy and self-awareness.

bioRxiv · Aug 31, 2025 · PreprintPlant Biology