BioinformaticsBMC BioinformaticsPeer-reviewed
Lokatt: A hybrid DNA nanopore basecaller with an explicit duration hidden Markov model and a residual LSTM network
Xuechun Xu, Nayanika Bhalla, Patrik L. Ståhl, Joakim Jaldén
Lokatt improves nanopore basecalling by combining an explicit duration HMM with a residual LSTM, achieving high accuracy and coverage on E. coli data.
10 citations