Author

Jan G. Kosiński

Adam Mickiewicz University in PoznańORCID 0000-0002-6806-0013Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:database / resource· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Marek ŻywickiiD· 3 shared Adriana GrabowskaiD· 1 shared Agnieszka Chełkowska-PauszekiD· 1 shared Agnieszka Rybak‐WolfiD· 1 shared Alessia BuratiniD· 1 shared Anna‐Maria BarciszewskaiD· 1 shared Julia Latowska-LysiakiD· 1 shared Julia Oliwia MisiorekiD· 1 shared

Activity by Year

2023-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersBioinformatics

Marek ŻywickiORCID

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3 papers

Recent·Most cited

BioinformaticsNucleic Acids ResearchPeer-reviewedJun 15, 2025

Characterization of bacterial intrinsic transcription terminators identified with TERMITe - a novel method for comprehensive analysis of Term-seq data

Jan G. Kosiński, Sandeepani Ranaweera, Agnieszka Chełkowska-Pauszek…·Marek Żywicki

The paper introduces TERMITe, a method for analyzing Term-seq data to identify bacterial transcription terminators and provides an atlas of validated termination sites across 13 species.

8 citationstop 4%

bacteria (other)long-read sequencing

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Cancer BiologyMolecular OncologyPeer-reviewedFeb 26, 2025

Transcriptome-wide analysis of circRNA and RBP profiles and their molecular and clinical relevance for GBM

Julia Latowska-Lysiak, Żaneta Zarębska, Marcin Piotr Sajek…·Katarzyna Rolle

The paper analyzes circRNA and RBP expression in GBM to identify their interactions and clinical relevance as stratification markers.

8 citations

humanbulk RNA-seq

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BioinformaticsPLoS Computational BiologyPeer-reviewedOct 18, 2023

AGouTI - flexible Annotation of Genomic and Transcriptomic Intervals

Jan G. Kosiński, Marek Żywicki

AGouTI is a flexible tool for annotating genomic and transcriptomic intervals using public databases, supporting custom files and transcriptomic coordinates.

DOI 10.1371/journal.pcbi.1011527

DNA methylationstatistical model

𝕏 PostBluesky