Author

Shiva Sadeghpour

California State University Los AngelesORCID 0000-0002-7017-7210Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:metagenomics· 2 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

Arkadiy I. GarberiD· 2 shared Gustavo A. RamíreziD· 2 shared A. Manna· 1 shared Brandon Wolk· 1 shared Catherine R. ArmbrusteriD· 1 shared Dyanna Jimenez· 1 shared E. Kim· 1 shared Fernando Paz-Melchor· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Arkadiy I. GarberORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

MagicLamp: a web server and software toolkit for targeted gene annotation of microbial functions

Arkadiy I. Garber, Isabella A. Viney, Nancy Merino, Gustavo Ramírez, Michael J. Pavia, Sean M. McAllister, Shiva Sadeghpour, A. Manna, Maya Kreger, Brandon Wolk, E. Kim, June Qu, Catherine R. Armbruster, Ileana Pérez‐Rodríguez

MagicLamp provides a toolkit and web server for targeted microbial function annotation using curated HMMs, enabling sensitive and specific gene annotation for specialized processes.

bioRxiv · Jul 22, 2026 · PreprintBioinformatics

Microbiological Survey of the San Pedro Basin Subseafloor

Dyanna Jimenez, Xiuhnel Zien, Fernando Paz-Melchor, Tiffany Smith, Gisselle Camas, Nicolina Trejo, Shiva Sadeghpour, M. Oscar Almacen, Seshan G. Goluhewa, Arkadiy I. Garber, Gustavo A. Ramírez

The paper surveys subseafloor microbial communities in the San Pedro Basin to establish a baseline for ecological and microbiological variation, supporting future monitoring and research.

bioRxiv · Jan 30, 2026 · PreprintEcology