Author

Joachim Burman

Uppsala UniversityORCID 0000-0002-7045-1806Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:experimental assay· 2 Assay:metabolomics· 2 Research Focus:database / resource· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Kim KultimaiD· 2 shared Marco CapucciniiD· 2 shared Ola SpjuthiD· 2 shared Payam Emami KhoonsariiD· 2 shared Stephanie HermaniD· 2 shared Alejandra N Gonzalez-BeltraniD· 1 shared Anders O. LarssoniD· 1 shared Carles FoguetiD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Kim KultimaORCID

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2 papers

Recent·Most cited

Interoperable and scalable data analysis with microservices: Applications in Metabolomics

Payam Emami Khoonsari, Pablo A Moreno, Sven Bergmann, Joachim Burman, Marco Capuccini, Matteo Carone, Marta Cascante, Pedro de Atauri, Carles Foguet, Alejandra N Gonzalez-Beltran, Thomas Hankemeier, Kenneth Haug, Sijin He, Stephanie Herman, David Johnson, , Ola Spjuth

The paper introduces a microservices-based framework for scalable data analysis, validated in metabolomics, enabling dynamic scaling and integration of software tools.

Bioinformatics · Mar 8, 2019Peer-reviewedBioinformatics

Container-based bioinformatics with Pachyderm

Jon Ander Novella, Payam Emami Khoonsari, Stephanie Herman, Daniel Whitenack, Marco Capuccini, Joachim Burman, Kim Kultima, Ola Spjuth

The paper demonstrates the use of Pachyderm for efficient and reproducible metabolomics workflows in bioinformatics.

Bioinformatics · Aug 7, 2018Peer-reviewedBioinformatics