Author

Shohreh Varmeh

Koch Institute for Integrative Cancer Research At MITORCID 0000-0002-7058-1184Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Andreas HeinzeliD· 1 shared Anna GattingeriD· 1 shared Brian A. JoughiniD· 1 shared Daniel A. AndersoniD· 1 shared Erika D. HandlyiD· 1 shared Ian Gordon CannelliD· 1 shared Konstantin KrismeriD· 1 shared Michael B. YaffeiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Andreas HeinzelORCID

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1 paper

Recent·Most cited

BioinformaticsCell ReportsPeer-reviewedAug 1, 2020

Transite: A computational motif-based analysis platform that identifies RNA-binding proteins modulating changes in gene expression

Konstantin Krismer, Molly A. Bird, Shohreh Varmeh…·Michael B. Yaffe

Transite identifies RNA-binding proteins modulating gene expression changes by analyzing RNA stability and degradation, validated with hnRNPC in chemotherapeutic resistance.

50 citations

humanbulk RNA-seq

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