Jonathan Paul Lynch

Digging for meaningful connections: associations between root phenotypes and rhizosphere microbial diversity in maize

This study examines the relationship between root phenotypes and rhizosphere microbial diversity in maize under drought and optimal conditions, finding that root anatomy, not architecture, is more strongly associated with microbial diversity.

Ploidy alters root anatomy and shapes the evolution of wheat polyploids

This study identifies ploidy-induced root anatomical changes in wheat that improved nutrient use efficiency and adaptation to Neolithic agroecosystems.

In silico analysis of the evolution of root phenotypes during maize domestication in Neolithic soils of Tehuacan

This study analyzes the evolution of root phenotypes in maize during domestication by linking ancient DNA, paleobotany, and modeling to environmental changes in Tehuacan Valley.

Exploring yield stability and the fitness landscape of maize landrace root phenotypes in silico

The paper uses computational modeling and machine learning to identify anatomical root phenotypes in maize landraces that enhance yield stability across environments.

Responses of root architectural and anatomical traits to low nitrogen stress in rice

This study examines how low nitrogen stress affects root architecture and anatomy in rice, identifying genetic variation that could improve nitrogen acquisition under leaching conditions.

Xylem perforation plate phenotypes affect water use and drought adaptation in maize (Zea mays L.)

This study shows that xylem perforation plate variation in maize affects water transport and drought adaptation through pleiotropic effects on root traits.