Author

Cody L. DePew

Pennsylvania State UniversityORCID 0000-0003-4760-228XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:development & morphogenesis· 1 Approach:experimental assay· 1 Assay:metagenomics· 1

Frequent Co-Authors

Jagdeep Singh SidhuiD· 2 shared Jonathan Paul LynchiD· 2 shared Agustin Jason· 1 shared Andy SwartleyiD· 1 shared Christopher StrockiD· 1 shared Elena GiulianoiD· 1 shared Elizabeth Leslie PaillaniD· 1 shared Ellen BinghamiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersSystems Biology

Jagdeep Singh SidhuORCID

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3 papers

Recent·Most cited

Systems BiologyPlant and SoilPeer-reviewedJul 11, 2026

Digging for meaningful connections: associations between root phenotypes and rhizosphere microbial diversity in maize

Elena Giuliano, Jagdeep Singh Sidhu, Iván López-Valdivia…·Tania Galindo‐Castañeda

This study examines the relationship between root phenotypes and rhizosphere microbial diversity in maize under drought and optimal conditions, finding that root anatomy, not architecture, is more strongly associated with microbial diversity.

2 citationstop 3%

plant (other)metagenomics

𝕏 PostBluesky

Plant BiologybioRxivPreprintOct 23, 2025

Cover crop microbiomes affect legume cash crop growth but not consistently through enriching nitrogen-fixing rhizobia

Kayla M. Clouse, Elizabeth Leslie Paillan, Cody L. DePew…·Liana T. Burghardt

The paper investigates how legume cover crops influence nitrogen-fixing rhizobia in cash crops, finding host-specific effects on nodulation and growth.

DOI 10.1101/2025.10.23.684197

plant (other)bulk RNA-seq

𝕏 PostBluesky

Plant BiologybioRxivPreprintMay 10, 2024

Xylem perforation plate phenotypes affect water use and drought adaptation in maize (Zea mays L.)

Christopher Strock, Cody L. DePew, Jagdeep Singh Sidhu…·Jonathan Paul Lynch

This study shows that xylem perforation plate variation in maize affects water transport and drought adaptation through pleiotropic effects on root traits.

DOI 10.1101/2024.05.10.593543

plant (other)experimental assay

𝕏 PostBluesky