Author

Sebastian Nilsson

AstraZeneca (United Kingdom)ORCID 0000-0002-7449-466XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:contrastive learning· 1 Research Focus:database / resource· 1 Research Focus:drug response / drug discovery· 1 Approach:graph neural network· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Michaël UghettoiD· 2 shared Andrej Lamov· 1 shared Andrés Martínez MoraiD· 1 shared Andriy Nikolov· 1 shared Anna A. GoglevaiD· 1 shared Benedek RózemberczkiiD· 1 shared David Geleta· 1 shared Dimitris PolychronopoulosiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Michaël UghettoORCID

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2 papers

Recent·Most cited

Community-aware explanations in knowledge graphs with XP-GNN

Andrés Martínez Mora, Dimitris Polychronopoulos, Michaël Ughetto, Sebastian Nilsson

This paper introduces XP-GNN, a method for explaining Graph Neural Networks in biological knowledge graphs by leveraging community structures, showing improved relevance in drug discovery use cases.

bioRxiv · Jan 21, 2024 · PreprintBioinformatics

Biological Insights Knowledge Graph: an integrated knowledge graph to support drug development

David Geleta, Andriy Nikolov, Gavin Edwards, Anna A. Gogleva, Richard Jackson, Erik Jansson, Andrej Lamov, Sebastian Nilsson, Marina Pettersson, Vladimir Poroshin, Benedek Rózemberczki, Timothy Scrivener, Michaël Ughetto, Eliseo Papa

The paper introduces a knowledge graph for drug development that integrates data from multiple sources and supports various tasks through customizable graph projections and machine learning models.

bioRxiv · Oct 28, 2021 · PreprintSystems Biology