Author

Shawn R. Narum

Columbia River Inter-Tribal Fish CommissionORCID 0000-0002-7470-7485Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:genome assembly· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:GWAS / association mapping· 1 Organism:human· 1

Frequent Co-Authors

Stuart C. WillisiD· 3 shared Ali AliiD· 1 shared Andrea Drauch SchreieriD· 1 shared Brian E. ScheffleriD· 1 shared Gary H. ThorgaardiD· 1 shared Geoffrey C. WaldbieseriD· 1 shared Jeramiah J. SmithiD· 1 shared Mohamed SalemiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersGenomics

Stuart C. WillisORCID

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Author profile →

3 papers

Recent·Most cited

De novo Genome Assemblies of Four Rainbow Trout Genetic Lines Reveal Structural Variants In Pursuit of a Pangenome Reference

Ali Ali, Geoffrey C. Waldbieser, Ramey C. Youngblood, Paul A. Wheeler, Brian E. Scheffler, Stuart C. Willis, Shawn R. Narum, Gary H. Thorgaard, Mohamed Salem, Yniv Palti

The paper presents de novo genome assemblies of four rainbow trout lines to identify structural variants and build a pangenome reference for studying domestication and adaptation.

Molecular Ecology Resources · Jun 17, 2026Peer-reviewedGenomics

Genome assembly and diagnostic DNA markers for sex of the largest freshwater fish in North America, the white sturgeon (Acipenser transmontanus).

Stuart C. Willis, Jeramiah J. Smith, Shawn R. Narum

The paper presents a genome assembly for white sturgeon and identifies genetic markers for sex determination, aiding conservation and aquaculture efforts.

bioRxiv · Nov 14, 2025 · PreprintGenomics

Inference of ploidy by leveraging read depth from amplicon sequencing

Thomas A. Delomas, Stuart C. Willis, Andrea Drauch Schreier, Shawn R. Narum

The paper introduces a beta-binomial mixture model to infer ploidy from biallelic SNP data, demonstrating its effectiveness across multiple ploidies in fish species.

bioRxiv · Jul 30, 2020 · PreprintBioinformatics